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Thread: program frozen? or jsut slow?

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i'm running bioinformatics program, cufflinks. it's been running 24 hours, analyzing sequence data. expect take while, think may frozen. @ first, program using cpu time, according system monitor. now, it's not using cpu, , status "sleeping". additionally, system keeps hanging second every couple of seconds. ie: mouse/keyboard freezes... etc... annoying.
also, in system monitor, under waiting channel, says hrtimer_nanosleep.

program frozen, or still going?

thanks,

annoyed @ pausing typing every word

did slow down computer when first started program, or after had been running day?

did slow down process "went sleep" (when changed sleeping status active or whatever) ?

scott


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